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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KLF5, Kruppel-like factor 5 (intestinal)
Sequence ID:NM_001730
Entrez Gene ID:688
Ensembl ID:ENSG00000102554

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 73633263 - 73650070

NM_001730 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15857363314173633725
58614597363599873636871
146015197363796173638020
152033497364984573651674

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3956532Full LengthBC007695Kruppel-like factor 5 (intestinal)
5454169Full LengthBC042131Kruppel-like factor 5 (intestinal)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001721  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001730 NP_001721 Q5T6X2
Q13887
zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
AF132818 AAF18307 Q5T6X2
Q13887
AF287272 AAF88068 Q5T6X2
Q13887
BC007695 AAH07695 Q5T6X2
Q13887
BC042131 AAH42131 Q5T6X2
Q13887
BT006641 AAP35287 Q5T6X2
Q13887
DQ893740 ABM84666  
DQ890581 ABM92198  
EF208215 ABM97548 A2TJX0
D14520 BAA03393 Q13887
AB030824 BAA96461 Q5T6X2
Q13887
AK296900 BAG59458 B4DL96
AK302280 BAG63623 A2TJX0
AK304284 BAG65143 B4E2I1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KLF5 NP_001721 R.norvegicus Klf5 84410   NP_445846 94
M.musculus Klf5 12224 Gene Info NP_033899 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)