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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ABI1, abl-interactor 1
Sequence ID:NM_001012750
NM_001012751
NM_001012752
NM_001178116
NM_001178119
NM_001178120
NM_001178121
NM_001178122
NM_001178123
NM_001178124
NM_001178125
NM_005470
RefSeqGene ID:NG_030025
Entrez Gene ID:10006
Ensembl ID:ENSG00000136754

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 27036743 - 27149959

 Exon Info From UCSC:
NM_001012750
NM_001012751
NM_001012752
NM_001178116
NM_001178119
NM_001178120
NM_001178121
NM_001178122
NM_001178123
NM_001178124
NM_001178125
NM_005470

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3531592Full LengthBC024254abl-interactor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001012770  NP_005461  NP_001012768  NP_001012769  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012750 NP_001012768   SH3_1
Abi_HHR
NM_001012751 NP_001012769   SH3_1
Abi_HHR
NM_001012752 NP_001012770   SH3_1
Abi_HHR
NM_001178116 NP_001171587    
NM_001178119 NP_001171590    
NM_001178120 NP_001171591    
NM_001178121 NP_001171592    
NM_001178122 NP_001171593    
NM_001178123 NP_001171594    
NM_001178124 NP_001171595    
NM_001178125 NP_001171596    
NM_005470 NP_005461 Q8IZP0 SH3_1
Abi_HHR

Related Sequences

 
mRNAGenPeptSwissProt
AF006516 AAB62569 Q8IZP0
U87166 AAC39757 Q8IZP0
AF001628 AAD00897 Q8IZP0
AF260262 AAF70309 Q8IZP0
BC024254 AAH24254 Q8IZP0
AF540955 AAN28379 Q8IZP0
FJ380057 ACJ12783 B6VEX3
FJ380058 ACJ12784 B6VEX4
FJ380059 ACJ12785 B6VEX5
AB040151 BAB55675 Q8IZP0
AB209268 BAD92505 Q59G41
AK291823 BAF84512 Q8IZP0
AK126803 BAG54374 B3KX62
AK296751 BAG59334 B4DKX2
AK298646 BAG60820 Q8IZP0
AK315914 BAH14285 B7Z9E9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABI1 NP_005461 R.norvegicus Abi1 79249   NP_077373 99
M.musculus Abi1 11308 Gene Info NP_001070658 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)