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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. COG3, component of oligomeric golgi complex 3
Sequence ID:NM_031431
NM_001204476
Entrez Gene ID:83548
Ensembl ID:ENSG00000136152

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q14.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 46103967 - 46110375


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5756412Full LengthBC038953component of oligomeric golgi complex 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_113619  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031431 NP_113619   Sec34

Related Sequences

 
mRNAGenPeptSwissProt
BC038953 AAH38953 Q96JB2
AF332595 AAK06848 Q96JB2
AF349676 AAK66974 Q96JB2
AF111707 AAM12423 Q8TE06
AK314387 BAG37012 Q96JB2
AK294959 BAG58033 B4DH72
AK304248 BAG65115 B4E2F3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COG3 NP_113619 M.musculus Cog3 338337 Gene Info NP_796355 96
R.norvegicus Cog3 361073   NP_001012157 96
D.melanogaster Cog3 33562   NP_608779 46
A.gambiae AgaP_AGAP003970 1278790   XP_318422 45
A.thaliana AT1G73430 843677   NP_001117595 39
C.elegans cogc-3 171867   NP_001021806 35
S.pombe cog3 2539758   NP_596819 26
S.cerevisiae COG3 856901   NP_011084 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)