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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PGRMC2, progesterone receptor membrane component 2
Sequence ID:NM_006320
Entrez Gene ID:10424
Ensembl ID:ENSG00000164040

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 129191296 - 129208948

NM_006320 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
22177129190392129192567
21782333129193516129193671
23343790129208527129209983

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4067832Full LengthBC016692progesterone receptor membrane component 2
4831185Full LengthBC092478progesterone receptor membrane component 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006311  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006320 NP_006311 O15173 Cyt-b5

Related Sequences

 
mRNAGenPeptSwissProt
BC016692 AAH16692 O15173
BC092478 AAH92478 O15173
DQ893193 ABM84119  
DQ893194 ABM84120  
DQ893694 ABM84620  
DQ896520 ABM87519  
DQ896521 ABM87520  
DQ896522 ABM87521  
DQ896866 ABM87865  
AK091741 BAC03737 Q8NB07
AJ002030 CAA05152 O15173

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PGRMC2 NP_006311 R.norvegicus Pgrmc2 361940   NP_001008375 90
M.musculus Pgrmc2 70804 Gene Info NP_081834 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)