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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PRKAB2, protein kinase, AMP-activated, beta 2 non-catalytic subunit
Sequence ID:NM_005399
Entrez Gene ID:5565
Ensembl ID:ENSG00000131791

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 146631143 - 146643723

NM_005399 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
114545146626686146631220
45464614146633290146633358
46154748146634018146634151
47494869146638076146638196
48704963146638424146638517
49645130146639345146639511
51315309146643567146643745
53105431146644007146644128

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6091476Full LengthBC053610protein kinase, AMP-activated, beta 2 non-catalytic subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005390  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005399 NP_005390 O43741 AMPKBI

Related Sequences

 
mRNAGenPeptSwissProt
BC053610 AAH53610 O43741
HQ257946 ADR82700  
AK292820 BAF85509 O43741
AK294863 BAG57967 B4DH06
AK304069 BAG64976 B4E214
AK316005 BAH14376 B4DH06
AK316183 BAH14554 B4E214
AJ224538 CAA12030 O43741

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRKAB2 NP_005390 M.musculus Prkab2 108097 Gene Info NP_892042 97
R.norvegicus Prkab2 64562   NP_072149 97
C.elegans aakb-1 181492   NP_510298 55
C.elegans aakb-2 176552   NP_499446 52
S.cerevisiae SIP2 852664   NP_011307 41
S.pombe SPCC1919.03c 2539130   NP_588485 41
N.crassa NCU03837 3876743   XP_960596 36
A.thaliana AKINBETA1 832243   NP_197615 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta