Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VPS37B, vacuolar protein sorting 37 homolog B (S. cerevisiae)
Sequence ID:NM_024667
Entrez Gene ID:79720
Ensembl ID:ENSG00000139722

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 123349881 - 123380712

NM_024667 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
222297123349878123352153
22982380123353026123353108
23812552123355436123355607
25532766123380498123380711

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3533384Full LengthBC005882vacuolar protein sorting 37 homolog B (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_078943  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024667 NP_078943 Q9H9H4 Mod_r

Related Sequences

 
mRNAGenPeptSwissProt
BC005882 AAH05882 Q9H9H4
AK022812 BAB14255 Q9H9H4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VPS37B NP_078943 R.norvegicus Vps37b 288659   NP_001099398 85
M.musculus Vps37b 330192 Gene Info NP_808544 84
D.melanogaster CG1115 40624   NP_649518 35
A.gambiae AgaP_AGAP003731 1271464   XP_310262 34
C.elegans vps-37 178944   NP_504474 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)