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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACADS, acyl-CoA dehydrogenase, C-2 to C-3 short chain
Sequence ID:NM_000017
RefSeqGene ID:NG_007991
Entrez Gene ID:35
Ensembl ID:ENSG00000122971

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ACYL-COA DEHYDROGENASE, SHORT-CHAIN, DEFICIENCY OF 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 121163688 - 121177251

NM_000017 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1164121163570121163733
165328121164828121164991
329478121174788121174937
479590121175158121175269
591742121175639121175790
743913121176082121176252
9141051121176335121176472
10521147121176622121176717
11481204121176942121176998
12051916121177098121177809

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4842286Full LengthBC025963acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000008  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000017 NP_000008 P16219 EC 1.3.8.1 Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M26393 AAA60307 P16219 EC 1.3.8.1
BC025963 AAH25963 P16219 EC 1.3.8.1
DQ892184 ABM83110    
DQ895378 ABM86304    
AK300645 BAG62333 B4DUH1  
AB527081 BAJ05798 D4QEZ8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACADS NP_000008 M.musculus Acads 11409 Gene Info NP_031409 91
R.norvegicus Acads 64304   NP_071957 90
A.gambiae AgaP_AGAP001951 1281174   XP_321112 72
D.melanogaster Arc42 42364   NP_650840 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)