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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. WSB2, WD repeat and SOCS box containing 2
Sequence ID:NM_018639
Entrez Gene ID:55884
Ensembl ID:ENSG00000176871

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 118470865 - 118474267

NM_018639 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
121683118470491118472162
16841791118472790118472897
17921902118473018118473128
19032075118474142118474314
20762176118476092118476192
21772308118480645118480776
23092553118480937118481181
25542722118490114118490282
27232833118498840118498950

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3910968Full LengthBC015887WD repeat and SOCS box-containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061109  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018639 NP_061109 Q9NYS7 WD40
SOCS_box

Related Sequences

 
mRNAGenPeptSwissProt
AF229181 AAF71302 Q9NYS7
AF163324 AAF80478 Q9NYS7
BC015887 AAH15887 Q9NYS7
HQ447263 ADQ31750  
AK294230 BAG57532 B4DFS1
AK295555 BAG58458 B4DIE6
AK298513 BAG60718 B4DPV6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WSB2 NP_061109 M.musculus Wsb2 59043 Gene Info NP_067514 96
R.norvegicus Wsb2 288692   NP_001007617 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)