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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMEM116, Transmembrane protein 116
Sequence ID:NM_001193531
NM_138341
NM_001193453
Entrez Gene ID:89894
Ensembl ID:ENSG00000198270

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 112369102 - 112450935

 Exon Info From UCSC:
NM_001193531
NM_138341
NM_001193453

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3839474Full LengthBC070135transmembrane protein 116
5193616Full LengthBC048796transmembrane protein 116
3355813IncompleteBC000282transmembrane protein 116
4686573IncompleteBC022360transmembrane protein 116

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001193453 NP_001180382    
NM_001193531 NP_001180460    
NM_138341 NP_612350 Q8NCL8  

Related Sequences

 
mRNAGenPeptSwissProt
BC000282 AAH00282 Q9BWF8
BC022360 AAH22360 Q8NCL8
BC048796 AAH48796 Q8NCL8
BC070135 AAH70135 Q8NCL8
HQ447555 ADQ32041  
AK074648 BAC11112 Q8NCL8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMEM116 NP_001180460 M.musculus Tmem116 77462 Gene Info NP_001155099 70
R.norvegicus Tmem116 690442   NP_001153097 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)