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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP2A2, ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
Sequence ID:NM_170665
NM_001681
RefSeqGene ID:NG_007097
Entrez Gene ID:488
Ensembl ID:ENSG00000174437

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
ACROKERATOSIS VERRUCIFORMIS 
DARIER DISEASE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 110786845 - 110788897

 Exon Info From UCSC:
NM_170665
NM_001681

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5503508Full LengthBC035588ATPase, Ca++ transporting, cardiac muscle, slow twitch 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_733765  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001681 NP_001672      
NM_170665 NP_733765 P16615 EC 3.6.3.8 E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase_N
Hydrolase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M23114 AAA53193 P16615 EC 3.6.3.8
M23115 AAA53194 P16615 EC 3.6.3.8
BC035588 AAH35588 P16615 EC 3.6.3.8
AY186578 AAO47398 P16615 EC 3.6.3.8
AK293877 BAG57266 P16615 EC 3.6.3.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP2A2 NP_733765 M.musculus Atp2a2 11938 Gene Info NP_001103610 99
R.norvegicus Atp2a2 29693   NP_001104293 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)