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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PRDM4, PR domain containing 4
Sequence ID:NM_012406
Entrez Gene ID:11108
Ensembl ID:ENSG00000110851

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q23-q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 108126642 - 108154376

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5587364Full LengthBC035581PR domain containing 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036538  

Protein Infomation

NM_012406 NP_036538 Q9UKN5 zf-C2H2

Related Sequences

AF144757 AAD55249 Q9UKN5
BC035581 AAH35581 Q9UKN5
BC068562 AAH68562 Q6NUK0
DQ891237 ABM82163  
DQ894422 ABM85348  
AK056378 BAG51692 B3KPI0
AL133083 CAB61401 Q9UKN5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PRDM4 NP_036538 M.musculus Prdm4 72843 Gene Info NP_857633 95
R.norvegicus Prdm4 170820   NP_579846 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)