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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SYCP3, synaptonemal complex protein 3
Sequence ID:NM_001177948
NM_001177949
NM_153694
RefSeqGene ID:NG_021181
Entrez Gene ID:50511
Ensembl ID:ENSG00000139351

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q

Chromosomal Position (from UCSC)

Chromosomal Position:12: 102122650 - 102133191

 Exon Info From UCSC:
NM_001177948
NM_001177949
NM_153694

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6616222Full LengthBC062662synaptonemal complex protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_710161  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177948 NP_001171419    
NM_001177949 NP_001171420    
NM_153694 NP_710161 Q8IZU3 Cor1

Related Sequences

 
mRNAGenPeptSwissProt
BC062662 AAH62662 Q8IZU3
AF492003 AAN06611 Q8IZU3
AF517774 AAP47204 Q8IZU3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SYCP3 NP_710161 M.musculus Sycp3 20962 Gene Info NP_035647 73
R.norvegicus LOC100362033 100362033   XP_002729826 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)