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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PTPRR, Protein tyrosine phosphatase, receptor type, R
Sequence ID:NM_002849
NM_001207015
NM_130846
NM_001207016
Entrez Gene ID:5801
Ensembl ID:ENSG00000153233

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 71031861 - 71058152

 Exon Info From UCSC:
NM_002849
NM_130846

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4538615Full LengthBC110900protein tyrosine phosphatase, receptor type, R
40109492Full LengthBC122866protein tyrosine phosphatase, receptor type, R
40109494Full LengthBC119777protein tyrosine phosphatase, receptor type, R
5314937IncompleteBC092469protein tyrosine phosphatase, receptor type, R
5585629IncompleteBC072386protein tyrosine phosphatase, receptor type, R

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002840  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001207015 NP_001193944      
NM_001207016 NP_001193945      
NM_002849 NP_002840 Q15256 EC 3.1.3.48 Y_phosphatase
NM_130846 NP_570897      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U77916 AAB54006 Q15256 EC 3.1.3.48
U77917 AAB54007 Q15256 EC 3.1.3.48
U42361 AAD09447 Q15256 EC 3.1.3.48
BC092469 AAH92469 Q569H9  
BC110900 AAI10901 Q2TAJ3  
BC119777 AAI19778 Q0VD90  
BC122866 AAI22867 Q05B41  
D64053 BAA10930 Q15256 EC 3.1.3.48
AK312376 BAG35294 Q15256 EC 3.1.3.48
AK295951 BAH12227 B7Z3J1  
AK304457 BAH14192 B7Z956  
AK304672 BAH14234 B7Z998  
X82635 CAA57957 Q15256 EC 3.1.3.48
Z79693 CAB01957 Q15256 EC 3.1.3.48
BX571751 CAE11876 Q7Z2V8  
CR749836 CAH18692 Q68CP6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTPRR NP_002840 M.musculus Ptprr 19279 Gene Info NP_035347 89
R.norvegicus Ptprr 94202   NP_446046 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta