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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HMGA2, High mobility group AT-hook 2
Sequence ID:NM_003483
NM_003484
RefSeqGene ID:NG_016296
Entrez Gene ID:8091
Ensembl ID:ENSG00000149948

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
LEIOMYOMA, UTERINE, SOMATIC 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 66218677 - 66352634

 Exon Info From UCSC:
NM_003483
NM_003484

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100064147Full LengthBC160115high mobility group AT-hook 2
3886316IncompleteBC018139high mobility group AT-hook 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003474  NP_003475  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003483 NP_003474 P52926 AT_hook
NM_003484 NP_003475   AT_hook

Related Sequences

 
mRNAGenPeptSwissProt
U28749 AAA68613 P52926
BC160115 AAI60115  
AF533653 AAO48741  
AF533654 AAO48742  
AY601861 AAU43851 Q1M188
AY601862 AAU43852 Q1M187
AY601863 AAU43853 Q1M186
AY601864 AAU43854 Q1M185
AY601865 AAU43855 Q1M183
AY601866 AAU43856 Q1M183
AY601867 AAU43857 P52926
AB209853 BAD93090 Q59EF8
X92518 CAA63295 P52926
Z31595 CAA83472 P52926

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HMGA2 NP_003474 M.musculus Hmga2 15364 Gene Info NP_034571 96
R.norvegicus Hmga2 84017   NP_114459 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)