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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ITGA5, integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
Sequence ID:NM_002205
Entrez Gene ID:3678
Ensembl ID:ENSG00000161638

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q11-q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 54789936 - 54812995

 Exon Info From UCSC:
NM_002205

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3629647Full LengthBC008786integrin, alpha 5 (fibronectin receptor, alpha polypeptide)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002196  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002205 NP_002196 P08648 FG-GAP
Integrin_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
M13918 AAA52467 P08648
BC008786 AAH08786 P08648
DQ892690 ABM83616  
EU176722 ABW03523  
AK291570 BAF84259 A8K6A5
AK312414 BAG35324 B2R627
AK304696 BAG65466 B4E3F4
X06256 CAA29601 P08648

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ITGA5 NP_002196 M.musculus Itga5 16402 Gene Info NP_034707 91
R.norvegicus Itga5 315346   NP_001101588 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)