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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LMO3, LIM domain only 3 (rhombotin-like 2)
Sequence ID:NM_018640
NM_001243611
NM_001243609
NM_001243613
NM_001001395
NM_001243612
NM_001243610
RefSeqGene ID:NG_029785
Entrez Gene ID:55885
Ensembl ID:ENSG00000048540

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 16701357 - 16758081

 Exon Info From UCSC:
NM_018640
NM_001001395

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4799836Full LengthBC026311LIM domain only 3 (rhombotin-like 2)
5274811Full LengthBC050085LIM domain only 3 (rhombotin-like 2)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001395  NP_061110  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001395 NP_001001395 Q8TAP4 LIM
NM_001243609 NP_001230538    
NM_001243610 NP_001230539    
NM_001243611 NP_001230540    
NM_001243612 NP_001230541    
NM_001243613 NP_001230542    
NM_018640 NP_061110 Q8TAP4 LIM

Related Sequences

 
mRNAGenPeptSwissProt
AF258348 AAF71368 Q9NYC6
BC017777 AAH17777 Q05D86
BC026311 AAH26311 Q8TAP4
BC050085 AAH50085 Q8TAP4
EU446874 ABZ92403  
AK095595 BAC04582 Q8TAP4
AB044745 BAD93349 Q58A67
AB044746 BAD93350 Q8TAP4
AK312418 BAG35328 B2R631
AK294474 BAG57701 B4DG90
AK294909 BAG57996 B4DH35
AK316021 BAH14392 B4DG90

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LMO3 NP_061110 M.musculus Lmo3 109593 Gene Info NP_997105 100
A.gambiae AgaP_AGAP010391 1272655   XP_311556 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)