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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARHGDIB, Rho GDP dissociation inhibitor (GDI) beta
Sequence ID:NM_001175
Entrez Gene ID:397
Ensembl ID:ENSG00000111348

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 15095457 - 15103646

NM_001175 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17061509494915095654
7077701509770915097772
7718471510080615100882
8489311510273515102818
93211241510346515103657
112512161511447015114561

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3621138Full LengthBC009200Rho GDP dissociation inhibitor (GDI) beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001166  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001175 NP_001166 P52566 Rho_GDI

Related Sequences

 
mRNAGenPeptSwissProt
L20688 AAA59539 P52566
BC009200 AAH09200 P52566
AF498927 AAM21075 P52566
DQ893303 ABM84229  
DQ896476 ABM87475  
AK311807 BAG34750 B2R4F3
AB451315 BAG70129 P52566
AB451445 BAG70259 P52566
X69549 CAA49280 P52566

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARHGDIB NP_001166 M.musculus Arhgdib 11857 Gene Info NP_031512 88
R.norvegicus Arhgdib 362456   NP_001009600 86
A.thaliana AT1G12070 837759   NP_172671 41
A.thaliana AT1G62450 842543   NP_176435 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta