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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLEC4A, C-type lectin domain family 4, member A
Sequence ID:NM_016184
NM_194447
NM_194448
NM_194450
Entrez Gene ID:50856
Ensembl ID:ENSG00000111729

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 8276227 - 8291203

 Exon Info From UCSC:
NM_016184
NM_194447
NM_194448
NM_194450

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915322Full LengthBC074822C-type lectin domain family 4, member A
30915470Full LengthBC074874C-type lectin domain family 4, member A
40125990Full LengthBC117439C-type lectin domain family 4, member A
40125992Full LengthBC117441C-type lectin domain family 4, member A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_919429  NP_057268  NP_919432  NP_919430  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016184 NP_057268 Q9UMR7 Lectin_C
NM_194447 NP_919429   Lectin_C
NM_194448 NP_919430   Lectin_C
NM_194450 NP_919432   Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF109146 AAF14348 Q9UMR7
AF067800 AAF75560 Q9UMR7
AF200738 AAG35593 Q9UMR7
BC074822 AAH74822 Q9UMR7
BC074874 AAH74874 Q9UMR7
BC117439 AAI17440 Q9UMR7
BC117441 AAI17442 Q9UMR7
AF328684 AAL56016 Q9UMR7
HQ258754 ADR83505  
AJ133532 CAB54001 Q9UMR7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLEC4A NP_057268 M.musculus Clec4a2 26888 Gene Info NP_001163803 55
R.norvegicus Clecsf6 474143   NP_001005899 55
M.musculus Clec4a4 474145 Gene Info NP_001005860 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)