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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NTM, Neurotrimin
Sequence ID:NM_001144058
NM_016522
NM_001048209
NM_001144059
Entrez Gene ID:50863
Ensembl ID:ENSG00000182667

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 131781111 - 132205544

 Exon Info From UCSC:
NM_001144058
NM_016522
NM_001048209
NM_001144059

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6166839Full LengthBC050716neurotrimin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057606  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001048209 NP_001041674    
NM_001144058 NP_001137530    
NM_001144059 NP_001137531    
NM_016522 NP_057606 Q9P121 ig
I-set

Related Sequences

 
mRNAGenPeptSwissProt
AF126426 AAF37591 Q9P121
BC050716 AAH50716 Q9P121
AY358331 AAQ88697 Q9P121
EF043567 ABK34282 Q9P121
HQ448641 ADQ33119  
AK293448 BAH11509 B7Z1H3
AK293487 BAH11520 B7Z1I4
AK294137 BAH11681 B7Z1Z5
AK315964 BAH14335 B7Z9J9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NTM NP_001137530 M.musculus Ntm 235106 Gene Info NP_758494 98
R.norvegicus Ntm 50864   NP_059050 98
D.melanogaster CG34391 5740816   NP_001097508 33
A.gambiae AgaP_AGAP004915 1275796   XP_315006 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)