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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GRIA4, glutamate receptor, ionotropic, AMPA 4
Sequence ID:NM_000829
NM_001077243
NM_001077244
NM_001112812
NR_046356
Entrez Gene ID:2893
Ensembl ID:ENSG00000152578

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 105845171 - 105845284

 Exon Info From UCSC:
NM_000829
NM_001077243
NM_001077244
NM_001112812

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068176Full LengthBC167786glutamate receptor, ionotrophic, AMPA 4
40034913IncompleteBC114549glutamate receptor, ionotrophic, AMPA 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000820  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000829 NP_000820 P48058 Lig_chan
ANF_receptor
NM_001077243 NP_001070711    
NM_001077244 NP_001070712    
NM_001112812 NP_001106283    

Related Sequences

 
mRNAGenPeptSwissProt
U16129 AAA95962 P48058
BC045546 AAH45546 P48058
BC114549 AAI14550 Q1WWK6
BC142654 AAI42655 P48058
BC146816 AAI46817 A6QL61
BC150209 AAI50210 P48058
BC167786 AAI67786  
FJ947075 ACR45952 C5IJI4
FJ947076 ACR45953 C5IJI4
AB115416 BAD23796 Q6L8Q8
AB209092 BAD92329 Q59GL7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GRIA4 NP_000820 M.musculus Gria4 14802 Gene Info NP_001106651 99
R.norvegicus Gria4 29629   NP_001106655 98
A.thaliana GLR3.4 839268   NP_001030971 26
A.thaliana GLR3.5 817800   NP_001031464 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)