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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KDM4D, lysine (K)-specific demethylase 4D
Sequence ID:NM_018039
Entrez Gene ID:55693
Ensembl ID:ENSG00000186280

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 94730933 - 94732674

NM_018039 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13889470684494707231
3894839470881794708911
48429709473018794732673

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40085403Full LengthBC122858jumonji domain containing 2D
40085404Full LengthBC119010jumonji domain containing 2D
30915196IncompleteBC074739jumonji domain containing 2D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060509  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018039 NP_060509 Q6B0I6 JmjC
JmjN

Related Sequences

 
mRNAGenPeptSwissProt
BC074739 AAH74739 Q6B0I6
BC119010 AAI19011 Q6B0I6
BC122858 AAI22859 Q6B0I6
AK001113 BAA91508 Q6B0I6
AK056162 BAG51636 Q6B0I6
AL137545 CAB70803 Q6B0I6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KDM4D NP_060509 M.musculus Kdm4d 244694 Gene Info NP_775609 73
R.norvegicus Kdm4d 689582   NP_001073180 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)