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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CPT1A, Carnitine palmitoyltransferase 1A (liver)
Sequence ID:NM_001876
NM_001031847
RefSeqGene ID:NG_011801
Entrez Gene ID:1374
Ensembl ID:ENSG00000110090

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CPT DEFICIENCY, HEPATIC, TYPE IA 

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 68523303 - 68525198

 Exon Info From UCSC:
NM_001876
NM_001031847

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3352642Full LengthBC000185carnitine palmitoyltransferase 1A (liver)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001867  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001031847 NP_001027017      
NM_001876 NP_001867 P50416 EC 2.3.1.21 Carn_acyltransf

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L39211 AAC41748 P50416 EC 2.3.1.21
BC000185 AAH00185 P50416 EC 2.3.1.21
BT009791 AAP88793 P50416 EC 2.3.1.21
AK314301 BAG36955 B2RAQ8  
AJ420378 CAD12576 Q8WZ48  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CPT1A NP_001867 M.musculus Cpt1a 12894 Gene Info NP_038523 87
R.norvegicus Cpt1a 25757   NP_113747 87
A.gambiae AgaP_AGAP010164 1279583   XP_319335 53
D.melanogaster whd 36109   NP_001163112 52
C.elegans cpt-1 174912   NP_496721 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta