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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPP6R3, Protein phosphatase 6, regulatory subunit 3
Sequence ID:NM_001164160
NM_001164161
NM_001164162
NM_001164163
NM_018312
NM_001164164
Entrez Gene ID:55291
Ensembl ID:ENSG00000110075

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 68272612 - 68382720

 Exon Info From UCSC:
NM_001164160
NM_001164161
NM_001164162
NM_001164163
NM_018312
NM_001164164

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40029058Full LengthBC105934SAPS domain family, member 3
40029064Full LengthBC105933SAPS domain family, member 3
40029065Full LengthBC107599SAPS domain family, member 3
3913160IncompleteBC020953SAPS domain family, member 3
4122190IncompleteBC007738SAPS domain family, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060782  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164160 NP_001157632    
NM_001164161 NP_001157633 Q5H9R7  
NM_001164162 NP_001157634    
NM_001164163 NP_001157635    
NM_001164164 NP_001157636    
NM_018312 NP_060782   SAPS

Related Sequences

 
mRNAGenPeptSwissProt
AF264779 AAG36934 Q5H9R7
AF264780 AAG36935 Q5H9R7
BC007738 AAH07738 Q5H9R7
BC020953 AAH20953 Q9H880
Q7L294
BC105933 AAI05934 Q5H9R7
BC105934 AAI05935 Q5H9R7
BC107599 AAI07600 Q5H9R7
DQ111954 AAZ99639 Q5H9R7
AK001920 BAA91978 Q5H9R7
AB046778 BAB13384 Q5H9R7
AK023950 BAB14737 Q9H880
AK057250 BAB71396 Q5H9R7
AK298180 BAG60451 B4DP39
AK300359 BAG62099 B4DTT7
AK302611 BAG63858 B4DYU6
AK303315 BAG64384 B4E0C2
AL389982 CAB97537 Q9NPQ7
AL834471 CAD39130 Q5H9R7
CR749815 CAH18675 Q5H9R7
CR933658 CAI45957 Q5H9R7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPP6R3 NP_001157634 M.musculus Ppp6r3 52036 Gene Info NP_083275 96
A.thaliana AT1G07990 837314   NP_172277 31
A.thaliana AT2G28360 817384   NP_180403 31
A.thaliana AT3G45190 823655   NP_190105 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)