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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SART1, squamous cell carcinoma antigen recognized by T cells
Sequence ID:NM_005146
Entrez Gene ID:9092
Ensembl ID:ENSG00000175467

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 65729216 - 65746565

 Exon Info From UCSC:
NM_005146

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3504745Full LengthBC001058squamous cell carcinoma antigen recognized by T cells

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005137  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005146 NP_005137 O43290 SART-1

Related Sequences

 
mRNAGenPeptSwissProt
BC001058 AAH01058 O43290
AF353625 AAK49523 O43290
BT006637 AAP35283 O43290
DQ891694 ABM82620  
EU176645 ABW03446  
AB006198 BAA24056 O43290
AK223016 BAD96736 O43290
AK293200 BAG56740 B4DDH9
AK297589 BAG59976 B4DMR4
AK298184 BAG60455 B4DP43
Y14314 CAA74694  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SART1 NP_005137 M.musculus Sart1 20227 Gene Info NP_058578 96
R.norvegicus Sart1 29678   NP_113784 95
D.melanogaster CG6686 34608   NP_723700 45
C.elegans F19F10.9 179140   NP_504952 37
A.thaliana DOT2 831541   NP_197180 32
N.crassa NCU11222 5847764   XP_001728424 32
S.pombe snu66 2542774   NP_593382 29
S.cerevisiae SNU66 854485   NP_014953 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)