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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRDX5, Peroxiredoxin 5
Sequence ID:NM_012094
NM_181651
NM_181652
Entrez Gene ID:25824
Ensembl ID:ENSG00000126432

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 64085651 - 64089280

 Exon Info From UCSC:
NM_012094
NM_181651
NM_181652

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5166149Full LengthBC110983peroxiredoxin 5
8322775Full LengthBC113723peroxiredoxin 5
8322777Full LengthBC113725peroxiredoxin 5
9052364Full LengthBC171733peroxiredoxin 5
9052365Full LengthBC143849peroxiredoxin 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_857635  NP_857634  NP_036226  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_012094 NP_036226 P30044 EC 1.11.1.15 Redoxin
NM_181651 NP_857634     Redoxin
NM_181652 NP_857635     Redoxin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF110731 AAF03750 P30044 EC 1.11.1.15
AF197952 AAF04856 P30044 EC 1.11.1.15
AF112212 AAF17200 P30044 EC 1.11.1.15
AF124993 AAF27531 P30044 EC 1.11.1.15
AF231705 AAF78899 P30044 EC 1.11.1.15
AF242525 AAF99605 P30044 EC 1.11.1.15
BC110983 AAI10984 P30044 EC 1.11.1.15
BC113723 AAI13724 P30044 EC 1.11.1.15
BC113725 AAI13726 P30044 EC 1.11.1.15
BC143849 AAI43850 B7ZLJ4  
BC171733 AAI71733 B7ZVW3  
HQ258129 ADR82883    
AJ249483 CAB62210 P30044 EC 1.11.1.15
CR457203 CAG33484 P30044 EC 1.11.1.15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRDX5 NP_036226 M.musculus Prdx5 54683 Gene Info NP_036151 86
R.norvegicus Prdx5 113898   NP_446062 80
A.gambiae AgaP_AGAP001325 4577336   XP_001238545 60
D.melanogaster CG7215 3772662   NP_001027191 60
N.crassa NCU06880 3875424   XP_959227 42
A.thaliana AT3G52960 824462   NP_190864 40
S.pombe SPCC330.06c 2538981   NP_587706 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)