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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC3A2, solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
Sequence ID:NM_001012662
NM_001012664
NM_001013251
NM_002394
NR_037193
NM_001012661
NM_001012663
Entrez Gene ID:6520
Ensembl ID:ENSG00000168003

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 62648384 - 62656343

 Exon Info From UCSC:
NM_001012662
NM_001012664
NM_001013251
NM_002394
NM_001012661
NM_001012663

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821990Full LengthBC003000solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
3505759Full LengthBC001061solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001013269  NP_001012682  NP_001012680  NP_002385  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012662 NP_001012680   Alpha-amylase
NM_001012664 NP_001012682   Alpha-amylase
NM_001013251 NP_001013269 P08195 Alpha-amylase
NM_002394 NP_002385 P08195 Alpha-amylase

Related Sequences

 
mRNAGenPeptSwissProt
J03569 AAA35536 P08195
J02769 AAA51540 P08195
J02939 AAA52497 P08195
BC001061 AAH01061 P08195
BC003000 AAH03000 P08195
EU832683 ACE87015  
EU832612 ACE87703  
AB018010 BAA84649 P08195
AK304497 BAG65305 B4E2Z3
AK304685 BAG65456 B4E3E4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC3A2 NP_002385 R.norvegicus Slc3a2 50567   NP_062156 77
M.musculus Slc3a2 17254 Gene Info NP_001154885 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)