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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPI1, spleen focus forming virus (SFFV) proviral integration oncogene spi1
Sequence ID:NM_001080547
NM_003120
Entrez Gene ID:6688
Ensembl ID:ENSG00000066336

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 47379731 - 47400035

 Exon Info From UCSC:
NM_001080547
NM_003120

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40080653BC111379spleen focus forming virus (SFFV) proviral integration oncogene spi1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003111  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080547 NP_001074016    
NM_003120 NP_003111 P17947 Ets

Related Sequences

 
mRNAGenPeptSwissProt
BC111379 AAI11380  
X52056 CAA36281 P17947

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPI1 NP_001074016 R.norvegicus Spi1 366126   NP_001005892 89
M.musculus Sfpi1 20375 Gene Info NP_035485 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)