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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC1A2, solute carrier family 1 (glial high affinity glutamate transporter), member 2
Sequence ID:NM_001195728
NM_001252652
NM_004171
RefSeqGene ID:NG_008727
Entrez Gene ID:6506
Ensembl ID:ENSG00000110436

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p13-p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 35282202 - 35440521


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146790Full LengthBC132768solute carrier family 1 (glial high affinity glutamate transporter), member 2
5276194IncompleteBC031313solute carrier family 1 (glial high affinity glutamate transporter), member 2
5300736IncompleteBC047052solute carrier family 1 (glial high affinity glutamate transporter), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004162  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001195728 NP_001182657    
NM_001252652 NP_001239581    
NM_004171 NP_004162 P43004 SDF

Related Sequences

 
mRNAGenPeptSwissProt
U01824 AAA18900 P43004
U03505 AAA50429 P43004
BC132768 AAI32769 P43004
AY066021 AAL57716 P43004
D85884 BAA28706 P43004
AB209444 BAD92681 Q59FL6
AK122843 BAG53756 A2A2U1
AK298769 BAG60911 B4DQE9
Z32517 CAA83532 P43004

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC1A2 NP_004162 R.norvegicus Slc1a2 29482   NP_058911 96
M.musculus Slc1a2 20511 Gene Info NP_001070982 95
C.elegans glt-1 180641   NP_001024394 64
D.melanogaster Eaat2 33247   NP_001162844 44
A.gambiae AgaP_AGAP007903 1278051   XP_555593 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)