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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZBTB48, Zinc finger and BTB domain containing 48
Sequence ID:NM_005341
Entrez Gene ID:3104
Ensembl ID:ENSG00000204859

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 6646266 - 6649332

 Exon Info From UCSC:
NM_005341

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3906038Full LengthBC013573zinc finger and BTB domain containing 48

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005332  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005341 NP_005332 P10074 zf-C2H2
BTB

Related Sequences

 
mRNAGenPeptSwissProt
L16896 AAA65124 P10074
BC013573 AAH13573 P10074
AF318381 AAL55888 Q8WYS1
DQ894173 ABM85099  
DQ894174 ABM85100  
AK290156 BAF82845 A8K291
AK312786 BAG35649 B2R702

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZBTB48 NP_005332 M.musculus Zbtb48 100090 Gene Info NP_598640 92
R.norvegicus Zbtb48 362668   NP_001013234 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)