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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHMP7, charged multivesicular body protein 7
Sequence ID:NM_152272
Entrez Gene ID:91782
Ensembl ID:ENSG00000147457

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 23104131 - 23119512

 Exon Info From UCSC:
NM_152272

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5093453Full LengthBC019110CHMP family, member 7
5551762Full LengthBC042050CHMP family, member 7
3633354IncompleteBC004344CHMP family, member 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689485  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152272 NP_689485 Q8WUX9 ESCRT-III

Related Sequences

 
mRNAGenPeptSwissProt
BC004344 AAH04344 Q8WUX9
BC019110 AAH19110 Q8WUX9
BC042050 AAH42050 Q8WUX9
AK315664 BAG38030 Q8WUX9
AK021776 BAG51048 B3KMN6
AK092500 BAG52561 B3KRZ9
AK097202 BAG53432 B3KUH0
AK296592 BAG59208 B4DKJ6
AL833843 CAD38703 Q8WUX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHMP7 NP_689485 R.norvegicus Chmp7 364419   NP_001102342 97
M.musculus Chmp7 105513 Gene Info NP_598839 96
A.gambiae AgaP_AGAP012459 1278583   XP_318197 30
C.elegans T24B8.2 174442   NP_495933 29
A.thaliana AT3G62080 825381   NP_567125 28
D.melanogaster CG5498 40250   NP_730525 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)