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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATP13A1, ATPase type 13A1
Sequence ID:NM_020410
Entrez Gene ID:57130
Ensembl ID:ENSG00000105726

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 19756011 - 19774473

 Exon Info From UCSC:
NM_020410

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4128479IncompleteBC009302ATPase type 13A1
4585878IncompleteBC069211ATPase type 13A1
100061633BC156250ATPase type 13A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065143  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020410 NP_065143 Q9HD20 E1-E2_ATPase
Hydrolase

Related Sequences

 
mRNAGenPeptSwissProt
AF288687 AAG01173 Q9HD20
BC009302 AAH09302 Q9HD20
BC069211 AAH69211 Q6NT90
BC156250 AAI56251  
AK026044 BAB15334 Q9HD20
AB058728 BAB47454 Q9HD20
AK074159 BAB84985 Q8TEG5
AK074920 BAC11294 Q8NC73
AK123780 BAC85690 Q6ZUA1
AK125861 BAC86325 Q6ZUA1
AK172778 BAD18759 Q6ZMG7
AK056420 BAG51704 Q9HD20
AK095287 BAG53019 Q9HD20
AL834180 CAD38877 Q8N3E5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP13A1 NP_065143 M.musculus Atp13a1 170759 Gene Info NP_573487 95
R.norvegicus Atp13a1 290673   NP_001099549 95
A.gambiae AgaP_AGAP008085 1277866   XP_317372 57
D.melanogaster CG6230 34546   NP_609490 56
C.elegans C10C6.6 178070   NP_502165 55
A.thaliana PDR2 832428   NP_197752 46
N.crassa NCU04898 3874554   XP_958407 45
S.cerevisiae SPF1 856681   NP_010883 43
S.pombe cta4 2542381   NP_593971 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)