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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STIM1, stromal interaction molecule 1
Sequence ID:NM_003156
RefSeqGene ID:NG_016277
Entrez Gene ID:6786
Ensembl ID:ENSG00000167323

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 4043576 - 4051556

 Exon Info From UCSC:
NM_003156

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4899542Full LengthBC021300stromal interaction molecule 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003147  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003156 NP_003147 Q13586 SAM_2

Related Sequences

 
mRNAGenPeptSwissProt
U52426 AAC51627 Q13586
BC021300 AAH21300 Q13586
DQ895509 ABM86435  
EU176341 ABW03792  
HQ317451 ADO20317 G0XQ39

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STIM1 NP_003147 M.musculus Stim1 20866 Gene Info NP_033313 97
R.norvegicus Stim1 361618   NP_001101966 97
A.gambiae AgaP_AGAP000175 1272088   XP_310961 44
D.melanogaster Stim 32556   NP_523357 43
C.elegans stim-1 175201   NP_741073 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)