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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. S1PR5, Sphingosine-1-phosphate receptor 5
Sequence ID:NM_001166215
NM_030760
Entrez Gene ID:53637
Ensembl ID:ENSG00000180739

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 10623622 - 10624222

 Exon Info From UCSC:
NM_001166215
NM_030760

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4754850Full LengthBC034703sphingosine-1-phosphate receptor 5
5286249Full LengthBC067781sphingosine-1-phosphate receptor 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_110387  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166215 NP_001159687    
NM_030760 NP_110387 Q9H228 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC034703 AAH34703 Q9H228
BC067781 AAH67781 Q9H228
AF331840 AAL57041 Q9H228
AF331841 AAL57042 Q8WXV2
AF331842 AAL57043 Q8WXV1
DQ891290 ABM82216  
DQ893341 ABM84267  
DQ894474 ABM85400  
DQ896661 ABM87660  
AK074661 BAC11119 Q9H228

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens S1PR5 NP_001159687 M.musculus S1pr5 94226 Gene Info NP_444420 87
R.norvegicus S1pr5 60399   NP_068543 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)