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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BSG, basigin (Ok blood group)
Sequence ID:NM_001728
NM_198589
NM_198590
NM_198591
RefSeqGene ID:NG_007468
Entrez Gene ID:682
Ensembl ID:ENSG00000172270

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 572620 - 582577

 Exon Info From UCSC:
NM_001728
NM_198589
NM_198591

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3867352Full LengthBC009040basigin (Ok blood group)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_940991  NP_001719  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001728 NP_001719 P35613 ig
NM_198589 NP_940991 Q54A51 ig
NM_198590 NP_940992    
NM_198591 NP_940993    

Related Sequences

 
mRNAGenPeptSwissProt
L10240 AAA68936 Q54A51
P35613
M87879 AAA91084 Q54A51
P35613
L20471 AAB41120 Q54A51
P35613
BC009040 AAH09040 Q54A51
P35613
AF548371 AAN40694 P35613
AY358113 AAQ88480 P35613
GU557064 ADD31881 P35613
GU557065 ADD31882 P35613
JF432780 ADZ15997  
D28441 BAA05807  
D45131 BAA08109 Q54A51
P35613
AB072923 BAB88938 P35613
AB091680 BAC67168 Q54A51
AB085790 BAC76828 P35613
AK296858 BAG59422 A8MZ77
AK297880 BAG60203 B4DNE1
AK302231 BAG63585 B4DY23
X64364 CAA45716 Q54A51
P35613

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BSG NP_001719 M.musculus Bsg 12215 Gene Info NP_033898 66
R.norvegicus Bsg 25246   NP_001103352 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)