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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MMS19, MMS19 nucleotide excision repair homolog (S. cerevisiae)
Sequence ID:NM_022362
Entrez Gene ID:64210
Ensembl ID:ENSG00000155229

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24-q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 99218080 - 99226643

 Exon Info From UCSC:
NM_022362

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4889876Full LengthBC080532MMS19 nucleotide excision repair homolog (S. cerevisiae)
40125680Full LengthBC117129MMS19 nucleotide excision repair homolog (S. cerevisiae)
3543044IncompleteBC006575MMS19 nucleotide excision repair homolog (S. cerevisiae)
3605877IncompleteBC002692MMS19 nucleotide excision repair homolog (S. cerevisiae)
4135275IncompleteBC009396MMS19 nucleotide excision repair homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071757  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022362 NP_071757 Q96T76 HEAT

Related Sequences

 
mRNAGenPeptSwissProt
AF007151 AAC19154 O43410
BC002692 AAH02692 Q96T76
BC006575 AAH06575 Q96T76
BC009396 AAH09396 Q96T76
BC080532 AAH80532 Q96T76
BC117129 AAI17130 Q96T76
AF319947 AAK52668 Q96T76
AF357881 AAK70402 Q96T76
AK027710 BAB55315 Q96T76
AK056581 BAB71223 Q96T76
AK056244 BAG51657 Q96T76
AK298995 BAG61084 Q96T76
AK304287 BAG65145 Q96T76
AJ306408 CAC29239 Q96T76

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MMS19 NP_071757 M.musculus Mms19 72199 Gene Info NP_082428 90
A.gambiae AgaP_AGAP003548 1274208   XP_313296 33
D.melanogaster Mms19 40626   NP_649519 32
S.cerevisiae MET18 854678   NP_012138 27
S.pombe SPAC1071.02 2541536   NP_594352 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)