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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCL19, chemokine (C-C motif) ligand 19
Sequence ID:NM_006274
Entrez Gene ID:6363
Ensembl ID:ENSG00000172724

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 34689563 - 34691274

NM_006274 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
32703468956834689835
2713643468992634690019
3654973469020634690338
4986843469108734691273

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5225849Full LengthBC027968chemokine (C-C motif) ligand 19

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006265  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006274 NP_006265 Q6IBD6
Q99731
IL8

Related Sequences

 
mRNAGenPeptSwissProt
U88321 AAC23905 Q6IBD6
Q99731
U77180 AAC50944 Q6IBD6
Q99731
BC027968 AAH27968 Q6IBD6
Q99731
DQ895236 ABM86162  
EU176240 ABW03691  
AB000887 BAA20383 Q6IBD6
Q99731
AK311945 BAG34886 Q6IBD6
AX772806 CAE06252  
CR456868 CAG33149 Q6IBD6
Q99731

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCL19 NP_006265 M.musculus Ccl19 24047 Gene Info NP_036018 78
M.musculus Gm2023 100039053 Gene Info XP_001472218 78
M.musculus Gm2564 100040035 Gene Info XP_001474036 78
M.musculus Gm2457 100039848 Gene Info XP_001473709 78
M.musculus Gm12407 100039789   XP_001473558 77
M.musculus Gm13309 100039973 Gene Info XP_001473928 77
M.musculus Gm2442 100039824 Gene Info XP_001473661 77
M.musculus LOC100043918 100043918   XP_001481287 77
M.musculus LOC100043921 100043921   XP_001481290 76
R.norvegicus Ccl19 362506   NP_001102131 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)