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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CDK5R1, cyclin-dependent kinase 5, regulatory subunit 1 (p35)
Sequence ID:NM_003885
Entrez Gene ID:8851
Ensembl ID:ENSG00000176749

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 30816762 - 30818270

NM_003885 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1763081410430814179
7738533081449330818269

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4392555Full LengthBC020580cyclin-dependent kinase 5, regulatory subunit 1 (p35)
4816946Full LengthBC026347cyclin-dependent kinase 5, regulatory subunit 1 (p35)
5263087Full LengthBC030792cyclin-dependent kinase 5, regulatory subunit 1 (p35)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003876  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003885 NP_003876 Q15078 CDK5_activator

Related Sequences

 
mRNAGenPeptSwissProt
BC020580 AAH20580 Q15078
BC026347 AAH26347 Q8TAM4
BC030792 AAH30792 Q8N619
BT019573 AAV38380 Q15078
HQ448723 ADQ33201  
X80343 CAA56587 Q15078

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDK5R1 NP_003876 M.musculus Cdk5r1 12569 Gene Info NP_034001 98
R.norvegicus Cdk5r1 116671   NP_446343 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta