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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMOD3, Tropomodulin 3 (ubiquitous)
Sequence ID:NM_014547
Entrez Gene ID:29766
Ensembl ID:ENSG00000138594

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q21.1-q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 52121863 - 52201285

NM_014547 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12095212182452122032
2104095215500752155206
4105665216141352161569
5676895217978552179907
6907795218125252181341
7809105218601152186141
91110185218861552188722
101911625219235152192494
116313075219408852194232
130846645220097252204328

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4421113Full LengthBC020542tropomodulin 3 (ubiquitous)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055362  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014547 NP_055362 Q9NYL9 Tropomodulin

Related Sequences

 
mRNAGenPeptSwissProt
AF177171 AAF31670 Q9NYL9
AF237631 AAF45299 Q9NYL9
BC020542 AAH20542 Q9NYL9
AK312569 BAG35464 Q9NYL9
AL137543 CAB70801 Q9NYL9
BX647277 CAI46036 Q5HYL6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMOD3 NP_055362 M.musculus Tmod3 50875 Gene Info NP_058659 90
R.norvegicus Tmod3 300838   NP_001011997 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)