Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MGAT5, mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
Sequence ID:NM_002410
RefSeqGene ID:NG_030324
Entrez Gene ID:4249
Ensembl ID:ENSG00000152127

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 135210375 - 135212192

 Exon Info From UCSC:
NM_002410

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063354Full LengthBC157048mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
100061790BC156313mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002410 NP_002401 Q09328 EC 2.4.1.155  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF113921 AAD22449 Q09328 EC 2.4.1.155
BC156313 AAI56314    
BC157048 AAI57049    
D17716 BAA04570 Q09328 EC 2.4.1.155

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MGAT5 NP_002401 M.musculus Mgat5 107895 Gene Info NP_660110 97
R.norvegicus Mgat5 65271   NP_075583 97
C.elegans gly-2 172360   NP_491874 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)