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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCSK6, proprotein convertase subtilisin/kexin type 6
Sequence ID:NM_002570
NM_138319
NM_138320
NM_138321
NM_138322
NM_138323
NM_138324
NM_138325
RefSeqGene ID:NG_030047
Entrez Gene ID:5046
Ensembl ID:ENSG00000140479

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q26.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 101844133 - 101983868

 Exon Info From UCSC:
NM_002570
NM_138319
NM_138320
NM_138321
NM_138322
NM_138323
NM_138324
NM_138325

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5206868IncompleteBC043562proprotein convertase subtilisin/kexin type 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612195  NP_612197  NP_002561  NP_612196  NP_612198  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002570 NP_002561 P29122 Peptidase_S8
P_proprotein
NM_138319 NP_612192    
NM_138320 NP_612193    
NM_138321 NP_612194    
NM_138322 NP_612195   Peptidase_S8
NM_138323 NP_612196   Peptidase_S8
P_proprotein
NM_138324 NP_612197   Peptidase_S8
P_proprotein
NM_138325 NP_612198   Peptidase_S8
P_proprotein

Related Sequences

 
mRNAGenPeptSwissProt
M80482 AAA59998 P29122
D28513 BAA05871 P29122
D87993 BAA21791 P29122
D87994 BAA21792 P29122
D87995 BAA21793 P29122
AB208955 BAD92192 Q59H04
AK301280 BAG62840 B4DVX8
AM491522 CAM33226 A2RQD9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCSK6 NP_002561 R.norvegicus Pcsk6 25507   NP_037131 93
M.musculus Pcsk6 18553 Gene Info NP_035178 92
C.elegans bli-4 172333   NP_001021543 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)