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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GNPAT, Glyceronephosphate O-acyltransferase
Sequence ID:NM_014236
RefSeqGene ID:NG_008240
Entrez Gene ID:8443
Ensembl ID:ENSG00000116906

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q42Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 231377013 - 231413539

 Exon Info From UCSC:
NM_014236

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821393Full LengthBC000450glyceronephosphate O-acyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055051  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_014236 NP_055051 O15228 EC 2.3.1.42 Acyltransferase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF035285 AAB88177 Q71V38  
AF043937 AAC24505 O15228 EC 2.3.1.42
BC000450 AAH00450 O15228 EC 2.3.1.42
AB209882 BAD93119 Q59EC9  
AK222773 BAD96493 Q53H08  
AK223304 BAD97024 Q53FI2  
AK314181 BAG36862 B2RAG5  
AK297982 BAG60291 B4DNM9  
AJ002190 CAA05242 O15228 EC 2.3.1.42

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GNPAT NP_055051 R.norvegicus Gnpat 84470   NP_445862 82
M.musculus Gnpat 14712 Gene Info NP_034452 81
C.elegans acl-7 174916   NP_496725 33
D.melanogaster Dhap-at 53586   NP_525010 33
A.gambiae AgaP_AGAP001908 1281219   XP_321157 32
N.crassa NCU11282 5847596   XP_001728326 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)