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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NVL, Nuclear VCP-like
Sequence ID:NM_002533
NM_206840
NM_001243147
NM_001243146
RefSeqGene ID:NG_029641
Entrez Gene ID:4931
Ensembl ID:ENSG00000143748

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q41-q42.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 224505426 - 224505632

 Exon Info From UCSC:
NM_002533
NM_206840

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4636004Full LengthBC012105nuclear VCP-like
4249184IncompleteBC005897nuclear VCP-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002524  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243146 NP_001230075    
NM_001243147 NP_001230076    
NM_002533 NP_002524 O15381 AAA
NM_206840 NP_996671    

Related Sequences

 
mRNAGenPeptSwissProt
U68140 AAB70457 O15381
U78772 AAB70460 O15381
BC005897 AAH05897 A0JLP9
BC012105 AAH12105 O15381
AF401208 AAL02167 Q96PA2
JF432850 ADZ16067  
AK293923 BAG57304 B4DF43
AK297070 BAG59590 B4DLM8
AK297396 BAG59836 B4DMC4
AK298244 BAG60510 B4DP98
AK298826 BAG60956 B4DQJ4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NVL NP_002524 M.musculus Nvl 67459 Gene Info NP_080447 88
R.norvegicus Nvl 289323   NP_001099450 86
D.melanogaster smid 38824   NP_523959 57
C.elegans mac-1 174974   NP_496814 55
A.gambiae AgaP_AGAP006205 1276867   XP_316268 54
S.pombe SPBC16E9.10c 2539968   NP_595792 52
S.cerevisiae RIX7 850625   NP_013066 51
A.thaliana CDC48C 821105   NP_186810 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)