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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. WARS, Tryptophanyl-tRNA synthetase
Sequence ID:NM_004184
NM_213646
NM_173701
NM_213645
RefSeqGene ID:NG_029914
Entrez Gene ID:7453
Ensembl ID:ENSG00000140105

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q32.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 100800125 - 100828142

 Exon Info From UCSC:
NM_004184
NM_213646
NM_173701
NM_213645

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3542671Full LengthBC017489tryptophanyl-tRNA synthetase
30418785Full LengthBC095453tryptophanyl-tRNA synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004175  NP_998810  NP_998811  NP_776049  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_004184 NP_004175 P23381 EC 6.1.1.2 WHEP-TRS
tRNA-synt_1b
NM_173701 NP_776049 P23381 EC 6.1.1.2 WHEP-TRS
tRNA-synt_1b
NM_213645 NP_998810     WHEP-TRS
tRNA-synt_1b
NM_213646 NP_998811     WHEP-TRS
tRNA-synt_1b

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M61715 AAA61298 P23381 EC 6.1.1.2
M77804 AAA67324 P23381 EC 6.1.1.2
BC017489 AAH17489 P23381 EC 6.1.1.2
BC095453 AAH95453 P23381 EC 6.1.1.2
AK291141 BAF83830 P23381 EC 6.1.1.2
AK056100 BAG51626 P23381 EC 6.1.1.2
AK300255 BAG62020 B4DTK8  
X59892 CAA42545 P23381 EC 6.1.1.2
X62570 CAA44450 P23381 EC 6.1.1.2
BX248006 CAD62335 P23381 EC 6.1.1.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WARS NP_776049 M.musculus Wars 22375 Gene Info NP_035840 90
R.norvegicus Wars 314442   NP_001013188 89
A.gambiae AgaP_AGAP003315 1279764   XP_319546 68
D.melanogaster Aats-trp 45399   NP_524826 63
C.elegans wrs-1 180231   NP_507683 62
N.crassa NCU06722 3877040   XP_960902 62
A.thaliana AT3G04600 819617   NP_001078104 61
S.pombe wrs1 2541841   NP_592983 61
S.cerevisiae WRS1 854056   NP_014544 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)