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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EIF2D, eukaryotic translation initiation factor 2D
Sequence ID:NM_001201478
NM_006893
Entrez Gene ID:1939
Ensembl ID:ENSG00000143486

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 206764973 - 206785812


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3463026Full LengthBC001585ligatin
4339127Full LengthBC039134ligatin
6067337Full LengthBC058905ligatin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008824  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001201478 NP_001188407    
NM_006893 NP_008824 P41214 SUI1

Related Sequences

 
mRNAGenPeptSwissProt
AF159586 AAD41909 P41214
AF220417 AAF34185 P41214
AF262403 AAF74205 P41214
BC001585 AAH01585 P41214
BC039134 AAH39134 P41214
BC058905 AAH58905 P41214
DQ891590 ABM82516  
DQ894784 ABM85710  
AK001852 BAA91942 P41214
AB209364 BAD92601 Q59FU5
AK294536 BAG57743 B4DGD2
AL162001 CAB82330 P41214

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EIF2D NP_008824 M.musculus Eif2d 16865 Gene Info NP_001129542 83
R.norvegicus Eif2d 498225   NP_001017489 83
D.melanogaster ligatin 64874   NP_477481 39
A.thaliana AT1G71350 843476   NP_177291 35
A.gambiae AgaP_AGAP011804 1280844   XP_320711 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)