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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SMOC1, SPARC related modular calcium binding 1
Sequence ID:NM_001034852
NM_022137
RefSeqGene ID:NG_028217
Entrez Gene ID:64093
Ensembl ID:ENSG00000198732

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 70346142 - 70499083

 Exon Info From UCSC:
NM_001034852
NM_022137

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4158532Full LengthBC008608SPARC related modular calcium binding 1
4549051Full LengthBC011548SPARC related modular calcium binding 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071420  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001034852 NP_001030024    
NM_022137 NP_071420 Q9H4F8 Kazal_1
Thyroglobulin_1

Related Sequences

 
mRNAGenPeptSwissProt
BC008608 AAH08608 Q9H4F8
BC011548 AAH11548 Q9H4F8
DQ891783 ABM82709  
DQ894967 ABM85893  
AK289988 BAF82677 Q9H4F8
AK313063 BAG35892 Q9H4F8
AJ249900 CAC10352 Q9H4F8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMOC1 NP_001030024 M.musculus Smoc1 64075 Gene Info NP_001139689 96
R.norvegicus Smoc1 314280   NP_001002835 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)