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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHRDL1, chordin-like 1
Sequence ID:NM_001143981
NM_001143982
NM_001143983
NM_145234
RefSeqGene ID:NG_012816
Entrez Gene ID:91851
Ensembl ID:ENSG00000101938

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 109919321 - 110035348

 Exon Info From UCSC:
NM_001143981
NM_001143982
NM_001143983
NM_145234

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3942645Full LengthBC002909chordin-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_660277  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001143981 NP_001137453    
NM_001143982 NP_001137454    
NM_001143983 NP_001137455    
NM_145234 NP_660277   VWC

Related Sequences

 
mRNAGenPeptSwissProt
BC002909 AAH02909 Q9BU40
AY608914 AAU25841 Q9BU40
AB209548 BAD92785 Q59FB2
AK293106 BAF85795 Q9BU40
AK092245 BAG52508 B3KRU6
AK297563 BAG59955 Q9BU40

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHRDL1 NP_001137454 M.musculus Chrdl1 83453 Gene Info NP_001107857 91
R.norvegicus Chrdl1 363455   NP_955796 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)