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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TCIRG1, T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3
Sequence ID:NM_006019
NM_006053
RefSeqGene ID:NG_007878
Entrez Gene ID:10312
Ensembl ID:ENSG00000110719

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
OSTEOPETROSIS, AUTOSOMAL RECESSIVE 1OSTM1
OSTM1
OSTM1

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 67810446 - 67818362

 Exon Info From UCSC:
NM_006019
NM_006053

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3905446Full LengthBC018133T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3
5210733Full LengthBC032465T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006044  NP_006010  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006019 NP_006010 Q13488 V_ATPase_I
NM_006053 NP_006044   V_ATPase_I

Related Sequences

 
mRNAGenPeptSwissProt
U45285 AAA97878 Q13488
AF025374 AAC35742 Q13488
BC018133 AAH18133 Q13488
BC032465 AAH32465 Q13488
AF497545 AAM18704 Q8TCH1
AY548967 AAS59834 Q6QBN8
AY548968 AAS59835 Q6QBN7
AY548969 AAS59836 Q6QBN6
AY548970 AAS59837 Q6QBN5
AY548971 AAS59838 Q6QBN4
AY708388 AAU20795 Q64F87
EU176593 ABW03394  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TCIRG1 NP_006010 M.musculus Tcirg1 27060 Gene Info NP_058617 85
R.norvegicus Tcirg1 293650   NP_954520 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)