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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP6AP2, ATPase, H+ transporting, lysosomal accessory protein 2
Sequence ID:NM_005765
RefSeqGene ID:NG_008874
Entrez Gene ID:10159
Ensembl ID:ENSG00000182220

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
MENTAL RETARDATION, X-LINKED, WITH EPILEPSY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 40440254 - 40465888

NM_005765 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11394044021540440353
1402704044823740448367
2714024045048540450616
4034984045650040456595
4996364045677840456915
6376904045793240457985
6918404045884340458992
8419604046001340460132
96120344046481240465885

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6575732Full LengthBC084541ATPase, H+ transporting, lysosomal accessory protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005756  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005765 NP_005756 O75787 Renin_r

Related Sequences

 
mRNAGenPeptSwissProt
AF248966 AAG44564 O75787
BC010395 AAH10395 O75787
BC084541 AAH84541 O75787
AY038990 AAK83467 O75787
AF291814 AAM47531 O75787
AF109363 AAQ13511 O75787
AY429341 AAR06910 O75787
AK075382 BAC11582 O75787
AK293510 BAH11525 B7Z1I9
AK296614 BAH12399 B7Z413
AK297007 BAH12473 B7Z487
AK297760 BAH12660 B7Z4S4
AK315948 BAH14319 B7Z9I3
Y17975 CAA76984 O75787
AL049929 CAB43210 O75787

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP6AP2 NP_005756 M.musculus Atp6ap2 70495 Gene Info NP_081715 94
R.norvegicus Atp6ap2 302526   XP_217592 93
A.gambiae AgaP_AGAP003430 1272803   XP_311717 30
D.melanogaster VhaM8.9 41104   NP_649876 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)