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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ASTN1, astrotactin 1
Sequence ID:NM_004319
NM_207108
Entrez Gene ID:460
Ensembl ID:ENSG00000152092

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 176830203 - 177133826

 Exon Info From UCSC:
NM_004319
NM_207108

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007266Full LengthBC146795astrotactin 1
40148746Full LengthBC142697astrotactin 1
4421377IncompleteBC015438astrotactin 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004319 NP_004310    
NM_207108 NP_996991    

Related Sequences

 
mRNAGenPeptSwissProt
BC015438 AAH15438 Q96BL7
BC142697 AAI42698 A5PL12
BC146795 AAI46796 A6H8Y4
AB006627 BAA22958 O14525
AK295126 BAG58151 B4DHI9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASTN1 NP_004310 M.musculus Astn1 11899 Gene Info NP_031521 98
R.norvegicus Astn1 304900   XP_222785 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)