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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PIR, pirin (iron-binding nuclear protein)
Sequence ID:NM_001018109
NM_003662
RefSeqGene ID:NG_012549
Entrez Gene ID:8544
Ensembl ID:ENSG00000087842

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 15397709 - 15511427

 Exon Info From UCSC:
NM_001018109
NM_003662

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3140037Full LengthBC002517pirin (iron-binding nuclear protein)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001018119  NP_003653  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001018109 NP_001018119 O00625 EC 1.13.11.24 Pirin
Pirin_C
NM_003662 NP_003653 O00625 EC 1.13.11.24 Pirin
Pirin_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC002517 AAH02517 O00625 EC 1.13.11.24
BT019583 AAV38390 O00625 EC 1.13.11.24
BT019584 AAV38391 O00625 EC 1.13.11.24
DQ891941 ABM82867    
DQ895128 ABM86054    
Y07867 CAA69194 O00625 EC 1.13.11.24
Y07868 CAA69195 O00625 EC 1.13.11.24
CR541822 CAG46621 O00625 EC 1.13.11.24

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PIR NP_001018119 M.musculus Pir 69656 Gene Info NP_081429 96
R.norvegicus Pir 363465   NP_001009474 96
A.thaliana AT2G43120 818914   NP_850385 57
A.thaliana PRN 825091   NP_191481 54
A.thaliana AT3G59260 825095   NP_191485 52
N.crassa NCU03369 3872451   XP_956304 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta